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gmuD [2019-07-23 11:13:05]
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gmuD [2019-07-23 11:13:05]

phospho-beta-mannosidase
Locus
BSU_05840
Isoelectric point
5.73
Molecular weight
54.17 kDa
Protein length
465 aa Sequence Blast
Gene length
1398 bp Sequence Blast
Function
glucomannan utilization
Product
phospho-beta-mannosidase
Essential
no
Synonyms
ydhP
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Metabolism → Carbon metabolism → Utilization of specific carbon sources → Utilization of glucomannan

    • Gene

    Coordinates
    628,630 → 630,027

    The protein

    Protein family

  • glycosyl hydrolase 1 family (according to UniProt)

    • Structure

  • 4B3K (from Streptococcus pyogenes, 50% identity) PubMed

    • Expression and Regulation

    Operons

    Genes
    gmuB-gmuA-gmuC-gmuD-gmuR-gmuE-gmuF-gmuG
    Description
    PubMed

    Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon

    • Regulatory mechanism

  • GmuR: repression, PubMed, in GmuR regulon
  • CcpA: repression, PubMed, in CcpA regulon
  • AbrB: activation, PubMed, in AbrB regulon

    • Regulation

  • induced by cellobiose (GmuR) PubMed
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    Biological materials

    Mutant

  • MGNA-C191 (ydhP::erm), available at the NBRP B. subtilis, Japan
  • BKE05840 (ΔgmuD::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_TGCCAAGTCTCTCTCCCCTT, downstream forward: _UP4_TAGATTTTCCTAAAGGTCAA
  • BKK05840 (ΔgmuD::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_TGCCAAGTCTCTCTCCCCTT, downstream forward: _UP4_TAGATTTTCCTAAAGGTCAA

    • References

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